BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D07LP1|AL428896
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig729 1801 0.0
>3x_Contig729
Length = 2040
Score = 1801 bits (908), Expect = 0.0
Identities = 909/910 (99%)
Strand = Plus / Minus
Query: 1 gatctatgaagtacagtataatgcagggtattgcagtgcaatatcgtacggtatagtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1794 gatctatgaagtacagtataatgcagggtattgcagtgcaatatcgtacggtatagtaca 1735
Query: 61 atgtagtgaagtggtctttccaggtattattaacactcgaaagctgttctacaataatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1734 atgtagtgaagtggtctttccaggtattattaacactcgaaagctgttctacaataatga 1675
Query: 121 ttttgtattttttctctaagcaaggaggatggaacgaatcaaagttgaacaatacacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1674 ttttgtattttttctctaagcaaggaggatggaacgaatcaaagttgaacaatacacttc 1615
Query: 181 agttttttttctaatagagtttcccttgtcttgctttattcaattgttggcagtgtgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1614 agttttttttctaatagagtttcccttgtcttgctttattcaattgttggcagtgtgaca 1555
Query: 241 aaaatttcagttatacacacgtctcgcgtcaccaattcctgaaaagtcgtagccttcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 aaaatttcagttatacacacgtctcgcgtcaccaattcctgaaaagtcgtagccttcagt 1495
Query: 301 gtaatctagcagatgtatttcttgcttgatccggtatgatataatctgaacagctacttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1494 gtaatctagcagatgtatttcttgcttgatccggtatgatataatctgaacagctacttg 1435
Query: 361 aatttgccttgaacttttctgtcactttttttctgttttgttatatttagtatgcgatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 aatttgccttgaacttttctgtcactttttttctgttttgttatatttagtatgcgatga 1375
Query: 421 tgtggtgtttacctgagatacacggaactactttatcgcttcgagtaagaaacagtggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 tgtggtgtttacctgagatacacggaactactttatcgcttcgagtaagaaacagtggtg 1315
Query: 481 gtcaatttatagaagcttttgctcttgtttctttcttgttctctttcctgctgttcttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 gtcaatttatagaagcttttgctcttgtttctttcttgttctctttcctgctgttcttct 1255
Query: 541 gtgctgctttgtctcttataagccttatttttcaatgttcttctttcttgttttagcttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 gtgctgctttgtctcttataagccttatttttcaatgttcttctttcttgttttagcttc 1195
Query: 601 tcccagtacgttacgtacgacaaaattcctaattgggatgaaacttaatggaaaagaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 tcccagtacgttacgtacgacaaaattcctaattgggatgaaacttaatggaaaagaatg 1135
Query: 661 tgcctctctcagatatcttgcaaagaatggtggaactcagtaaaagtaaagdgaaggaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1134 tgcctctctcagatatcttgcaaagaatggtggaactcagtaaaagtaaagagaaggaag 1075
Query: 721 gggagtctgacgtaggagggaaaccgattgttttcagtttgttcttcctcgtggattgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 gggagtctgacgtaggagggaaaccgattgttttcagtttgttcttcctcgtggattgtt 1015
Query: 781 tactcgcgcgtgtctgtcacttctagtctcgtcctgttttctcaattcgttcttcttttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 tactcgcgcgtgtctgtcacttctagtctcgtcctgttttctcaattcgttcttcttttg 955
Query: 841 ttgttacgactggttgcttataacgtgacactttatggagggaaagaacaattgagtaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 ttgttacgactggttgcttataacgtgacactttatggagggaaagaacaattgagtaag 895
Query: 901 gattatcgga 910
||||||||||
Sbjct: 894 gattatcgga 885
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8139
Number of Sequences: 1807
Number of extensions: 8139
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)